mtor-atlas
https://mtor-atlas-mcp.mtor-atlas.workers.dev
Registry code: 6d2ceb4a31590738
Oliver's mTOR Atlas is a curated, evidence-labelled corpus of mTOR research (studies, entities, signed pathway relations, open questions).
How to use it well:
- endpoint
- https://mtor-atlas-mcp.mtor-atlas.workers.dev/mcp
- protocol
- streamable-http ·2025-06-18
- authentication
- none observed
- public key
- none — nobody has proven they own this listing · is it yours? claim it
- karma
- 0 · newcomer
- Is mtor-atlas live?
- Yes — it answered the hub's last check (checked 2h ago). It answered 99% of checks over the last 30 days.
- Is mtor-atlas free to use?
- Yes — the hub reached it with no key and no payment.
- What tools does mtor-atlas have?
- 11 tools: evidence_between, get_study, get_question, search_entities, get_entity, get_relation, find_relations, atlas_about, ….
- Is mtor-atlas safe to connect?
- The hub found no text in its card or tool descriptions aimed at the agent reading them. It measures what the server answers, not its code — grant it only the access its tools need.
90 days 99.4%· all time 99.4%
last good check
of 11 tools
- degraded → live
- live → degraded· timeout after 20000ms
- degraded → live
- degraded → live
- live → degraded· timeout after 20000ms
- used for
- search mtor research studies
- find pathway relations between entities
- find contested findings
- get an mtor study record
- takes → gives
- text → data, text
- tools
- 11 reads
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successful
what callers paid
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find_relations reads open 27h ago
Signed, evidence-linked pathway relations (claims such as "Rheb activates mTORC1"). Filter by an entity on either end, by source/target, effect, contested status or minimum strength of the best supporting evidence.
{ "type": "object", "$schema": "http://json-schema.org/draft-07/schema#", "properties": { "limit": { "type": "integer", "default": 20, "maximum": 50, "minimum": 1 }, "effect": { "enum": [ "activates", "inhibits", "binds", "recruits", "required-for", "context-dependent", "no-effect" ], "type": "string" }, "entity": { "type": "string", "description": "Entity on either end of the relation" }, "offset": { "type": "integer", "default": 0, "maximum": 9007199254740991, "minimum": 0, "description": "For the next page: pass next_offset from the previous answer." }, "source": { "type": "string" }, "target": { "type": "string" }, "contested_only": { "type": "boolean", "description": "Only relations marked contested or with conflicting studies" }, "strongest_at_least": { "enum": [ "S", "H", "A", "M", "R", "PP", "RT" ], "type": "string", "description": "Keep relations whose best supporting study is at least this code in the order S > H > A > M" } } }arguments 58 linesatlas_about reads open 2h ago
Dataset version, corpus snapshot date, counts, evidence-code legend and how to cite the dataset.
{ "type": "object", "properties": {} }arguments 4 linesfind_contradictions reads open 2h ago
Relations the Atlas marks as contested or that carry conflicting studies, with both sides of the evidence. Optionally limited to one entity.
{ "type": "object", "$schema": "http://json-schema.org/draft-07/schema#", "properties": { "limit": { "type": "integer", "default": 20, "maximum": 50, "minimum": 1 }, "entity": { "type": "string" } } }arguments 15 lineslist_questions reads open 5h ago
The Atlas's open questions (evidence gaps with testable hypotheses) and frontier questions.
{ "type": "object", "$schema": "http://json-schema.org/draft-07/schema#", "properties": { "kind": { "enum": [ "open-question", "frontier" ], "type": "string" } } }arguments 13 linessearch_studies reads open 5h ago
Search the curated studies by keywords (title, finding, authors, journal, model system), optionally filtered by evidence code, a linked entity (gene, drug, disease...) and year range. Returns summary records with evidence codes and URLs.
{ "type": "object", "$schema": "http://json-schema.org/draft-07/schema#", "properties": { "limit": { "type": "integer", "default": 20, "maximum": 50, "minimum": 1 }, "query": { "type": "string", "description": "Keywords, e.g. \"rapamycin lifespan mice\". Omit to list by filters only." }, "entity": { "type": "string", "description": "Only studies linked to this entity (name, synonym or id), e.g. \"Rheb\"." }, "offset": { "type": "integer", "default": 0, "maximum": 9007199254740991, "minimum": 0, "description": "For the next page: pass next_offset from the previous answer." }, "year_to": { "type": "integer", "maximum": 9007199254740991, "minimum": -9007199254740991 }, "year_from": { "type": "integer", "maximum": 9007199254740991, "minimum": -9007199254740991 }, "evidence_code": { "type": "array", "items": { "enum": [ "S", "H", "A", "M", "R", "PP", "RT" ], "type": "string" }, "description": "Keep only these evidence codes, e.g. [\"H\",\"S\"] for human evidence." } } }arguments 53 linesevidence_between reads unknown 27h ago
Direct curated relations between two entities (either direction) with full cards for the supporting and conflicting studies. Answers questions such as "what is the evidence that A acts on B?".
{ "type": "object", "$schema": "http://json-schema.org/draft-07/schema#", "required": [ "a", "b" ], "properties": { "a": { "type": "string" }, "b": { "type": "string" } } }arguments 16 linesget_study reads unknown 2h ago
Full record for one study by Atlas ID (e.g. "SAB1994"): abstract excerpt, extracted findings, linked entities, the relations it supports or contradicts, related open questions.
{ "type": "object", "$schema": "http://json-schema.org/draft-07/schema#", "required": [ "sid" ], "properties": { "sid": { "type": "string", "description": "Atlas study ID, e.g. \"SAB1994\"" } } }arguments 13 linesget_question reads unknown 27h ago
One open or frontier question by ID (e.g. "H1", "F2"): the gap, what changed, what is still open, how it could be tested, linked studies.
{ "type": "object", "$schema": "http://json-schema.org/draft-07/schema#", "required": [ "id" ], "properties": { "id": { "type": "string" } } }arguments 12 linessearch_entities reads unknown 24h ago
Find genes/proteins, complexes, drugs, diseases, processes, nutrients and outcomes by name or synonym.
{ "type": "object", "$schema": "http://json-schema.org/draft-07/schema#", "required": [ "query" ], "properties": { "type": { "type": "string", "description": "Optional type filter, e.g. \"Drug\", \"Gene/Protein\", \"Disease\"" }, "limit": { "type": "integer", "default": 20, "maximum": 100, "minimum": 1 }, "query": { "type": "string", "description": "Name or synonym, e.g. \"raptor\", \"sirolimus\"" } } }arguments 23 linesget_entity reads unknown 5h ago
One entity (gene/protein, complex, drug, disease, process...) with its linked studies as short cards (first studies_limit) and every pathway relation it takes part in as a one-line claim. Accepts an id, a name or a synonym.
{ "type": "object", "$schema": "http://json-schema.org/draft-07/schema#", "required": [ "entity" ], "properties": { "entity": { "type": "string", "description": "e.g. \"mTORC1\", \"Rheb\", \"rapamycin\"" }, "studies_limit": { "type": "integer", "default": 25, "maximum": 50, "minimum": 0 } } }arguments 19 linesget_relation reads unknown 24h ago
One pathway relation by ID (e.g. "RHEB-MTORC1"): mechanism, boundary conditions, confidence, supporting and conflicting studies.
{ "type": "object", "$schema": "http://json-schema.org/draft-07/schema#", "required": [ "id" ], "properties": { "id": { "type": "string" } } }arguments 12 lines
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